Plant Genetic Resources:
Characterization and
Utilization
cambridge.org/pgr
Research Article
Cite this article: Alemayehu D, Garedew W,
Tesfaye Abebe A (2022). Phenotypic
characterization of Amaro coffee (Coffea
arabica L.) local accessions using multi-variate
techniques at Awada, Southern Ethiopia. Plant
Genetic Resources: Characterization and
Utilization 1–9. https://doi.org/10.1017/
S1479262122000119
Received: 19 June 2021
Revised: 12 April 2022
Accepted: 20 April 2022
Key words:
Clustering; Coffee arabica; phenotypic
characterization; principal component;
Shannon–Weaver index
Author for correspondence:
Abush Tesfaye Abebe, E-mail: At.Abebe@cgiar.
org
© The Author(s), 2022. Published by
Cambridge University Press on behalf of NIAB
Phenotypic characterization of Amaro coffee
(Coffea arabica L.) local accessions using
multi-variate techniques at Awada,
Southern Ethiopia
Desalegn Alemayehu
1
, Weyessa Garedew
2
and Abush Tesfaye Abebe
3
1
Jimma Agricultural Research Center, Jimma, Ethiopia;
2
Jimma University, College of Agriculture and Veterinary
Medicine, Jimma, Ethiopia and
3
International Institute of Tropical Agriculture, Ibadan, Nigeria
Abstract
As a country of origin of coffee, Ethiopia is endowed with an immense diversity of the crop in
its diverse coffee-growing agro-ecologies. Amaro Kelo is one of the major coffee production
agro-ecologies in Ethiopia, where the genetic diversity of its landrace coffee germplasm was
not properly characterized previously. The study aimed to characterize 64 Amaro Kelo
local coffee accessions to understand the potential of the accessions for utilization in future
coffee genetic improvement efforts. The experiment was laid out in an 8 × 8 simple lattice
design with two replications at Awada Agricultural Research Sub-Center. Datawere collected
on 19 quantitative and 10 qualitative traits, and subjected to multivariate analyses, i.e. cluster
and principal component analyses. The cluster analysis identified five clusters based on the
quantitative characters, and the distances between most of the clusters were highly significant
at P < 0.01. Principal component analysis revealed the first six principal components with
Eigenvalues greater than one accounted for 77.7% of the total variation. The first two principal
components with respective contributions of 23.32 and 18.85% cumulatively accounted for
42.2% of the total variation in the accessions. In addition, high values of Shannon-diversity
index were found for the qualitative traits: branching habit, growth habit, fruit shape, overall
appearance and stem habit. In general, the multivariate analyses confirmed the presence of
high variation among the studied Amaro-Kelo coffee accessions that might serve as an
important genetic resource for future coffee genetic improvement or conservation efforts.
Introduction
Arabica coffee (Coffea arabica L.) is predominantly grown in the tropical and subtropical
regions of the world (Berthaud and Charrier, 1988; Davis et al., 2012). It is the only allotetra-
ploid species of the genus (2n =4x = 44) (Lashermes et al., 1999; Benti et al., 2020). Coffee is
one of the most important beverages globally (Labouisse et al., 2008), ranking second after oil
in international trade (Geromel et al., 2006; Hameed et al., 2018). More than 2.5 billion cups of
coffee are consumed daily across the globe (Coffee Industry Statistics, 2020), with 1.8–2.0%
annual growth in consumption globally (Hameed et al., 2018; ICO, 2020), and 17% yearly
growth of global green bean production and consumption in the past decade (Hameed
et al., 2018).
Ethiopia is one of Africa’s most important Arabica coffee-producing and exporting
countries and the sixth most important coffee producer worldwide (ICO, 2018; USDA,
2018). The crop is mainly produced in the southern, southwestern and eastern parts of the
country. The total area coverage of coffee in Ethiopia is estimated to be 758,523.29 ha, of
which about 95% is produced by 4 million smallholder farmers (CSA, 2020). The estimated
annual national production of coffee was 8.04 million of 60 kg bags, while the average national
productivity was about 636 kg/ha (CSA, 2020).
The plateaus of central Ethiopia are reported as the origin of Arabica coffee from a rela-
tively recent hybridization between Robusta coffee (Coffea canephora Pierre ex A. Froehner)
and C. eugenioides S. Moore or their ecotypes (Tesfaye et al., 2007; Lashermes et al., 2011).
Arabica coffee has its primary centre of origin and diversity in the highlands of southwestern
Ethiopia (Charrier and Berthaud, 1985; Wrigley, 1988; Belachew, 2000). It is the species nat-
urally occurring in Ethiopia and South Sudan (Davis et al., 2012). As the centre of origin of
Arabica coffee, Ethiopia is endowed with rich genetic resources of coffee in its diverse coffee-
growing agro-ecologies (Hindorf and Omondi, 2011; Benti et al., 2020). Amaro Kelo, where
the local coffee accessions used in this study were collected, is one of the major coffee produc-
tion agro-ecologies with high diversity of the crop in the country.
Agro-morphological traits, such as size and shape of leaf and plant form, colour of the
shoot tip, characteristics of the fruit, angle of branching and length of internodes, are vital
https://doi.org/10.1017/S1479262122000119 Published online by Cambridge University Press