Voltage-Dependent STM Images of Covalently Bound Molecules on Si(100)
David F. Padowitz*
Department of Chemistry, Amherst College, Amherst, Massachusetts 01002
Robert J. Hamers
Department of Chemistry, UniVersity of WisconsinsMadison, 1101 UniVersity AVenue,
Madison, Wisconsin 53706
ReceiVed: May 12, 1998; In Final Form: August 17, 1998
Several alkenes chemisorbed on silicon(100)-(2 × 1) have been studied by scanning tunneling microscopy.
Images of these molecules are strongly bias dependent, typically changing from mounds to depressions as
the sample bias voltage is changed from -2.5 to -1.0 V. Image contrast involves both a reduced barrier for
tunneling through the molecule and alteration of the silicon surface states by bonding.
I. Introduction
Scanning tunneling microscope images of molecules often
strikingly match the chemist’s intuition, but exactly how
molecules are imaged is not obvious. Adsorbed molecules alter
surface electronic structure, produce complex couplings between
tip and substrate, and can be directly involved in resonant
tunneling. Theoretically, the fundamentals of tunneling are well
established and many computational approaches have been
developed.
1-3
Detailed calculations of STM imaging have often
been done for atoms on surfaces, but molecular adsorbates
greatly increase the complexity and cost of computation.
4-6
There is a need for systematic experimental results on well-
characterized systems to which theory can be compared. It is
also worthwhile to develop intuitive viewpoints to complement
computational methods and suggest new avenues for research.
Of the many STM experiments on adsorbed molecules, a
number have specifically addressed the mechanisms of image
contrast. Recently an extensive experimental and computational
study of alkanes physisorbed on graphite examined the influence
of different functional groups to illuminate the interplay of
“topographic” and “electronic” effects.
7
Other recent STM
experiments bear on general problems of electron transport
through molecules, such as conduction through “molecular
wires” or conditions for resonant tunneling.
8-10
This paper presents experimental observations of dramatic
voltage-dependent variations in images of organic molecules
chemisorbed on silicon. The experimental system is well-
characterized and versatile. For the clean silicon(100)-(2 × 1)
surface, the connection between electronic structure and STM
images is thoroughly understood.
11
Organic molecules can be
covalently bound to silicon by the reaction of alkenes with the
Si(100)-(2 × 1) surface in a vacuum. Though this chemistry
is new and still being actively explored, the bonding and
resulting geometries have been established for a number of
molecules.
12
This reaction is very clean, applicable to a variety
of molecules, and the resulting silicon-carbon bonds are very
stable. Most molecules examined gave reproducible images for
low coverages at room temperature during rapid bias voltage
changes. This allowed precise location of the molecules with
respect to the silicon lattice and parallel imaging of multiple
biases during a single scan. A simple qualitative model explains
our results and suggests a variety of further experiments.
II. Experimental Section
Substrates were cut from commercial silicon(100) wafers
(Wacker-Chemtronic, <0.10 Ω-cm n-type, P- or Sb-doped),
rinsed in methanol (Baker certified electronic grade), and
mounted on a tungsten holder with tantalum clips and silicon
spacers. Surface contaminants were oxidized by a 15 min UV-
ozone treatment. The sample was introduced into the UHV
system through a load-lock. After outgassing in UHV for 8 h
at 575 °C, the silicon was flashed briefly to 1150 °C to remove
surface oxide while maintaining the chamber pressure below 5
× 10
-10
Torr. To further reduce reactive gases, a titanium
sublimation pump with a LN
2
cold trap was run prior to flashing
and the trap kept filled throughout imaging.
Dosing was typically done 1 h after flashing the sample.
Alkenes (cyclopentene, 98%; cis-cyclooctene, 95% (remainder
cyclooctane); 1,5-cyclooctadiene, 99
+
%; and 1,3,5,7-cyclooc-
tatetraene, 98%, all Aldrich) were degassed by several freeze-
pump-thaw cycles. The alkenes were admitted through a leak
valve and dosing tube a few centimeters from the surface.
Chamber pressures of 1 × 10
-9
to 1 × 10
-8
Torr for 10-20 s
resulted in coverages on the order of 5% of saturation. Imaging
began shortly after dosing and continued for several hours.
The STM used a Burleigh “inchworm” coarse approach
mechanism, a tube scanner, and custom electronics. Tips were
electrochemically etched tungsten, annealed in a vacuum.
Tunneling currents ranged from 100 pA to 2 nA. All images
were taken in constant current mode. Images at multiple biases
could be obtained simultaneously by switching the bias on
alternate scan lines. Sets of images were also taken sequentially
at differing bias, adjusting the current for constant gap resistance.
Barrier height images were obtained by applying a small
modulation voltage to the z-piezo to vary the sample-tip distance
and using a lock-in amplifier to extract the resulting variation
in tunneling current. Because the piezoelectric had not been
calibrated against modulation frequency, barrier heights were
approximate.
* Author to whom correspondence should be addressed. Telephone:
(413) 542-2660. Fax: (413) 542-2735. E-mail: dfpadowitz@amherst.edu.
8541 J. Phys. Chem. B 1998, 102, 8541-8545
10.1021/jp982229v CCC: $15.00 © 1998 American Chemical Society
Published on Web 10/02/1998