Ecological Modelling 220 (2009) 2009–2023
Contents lists available at ScienceDirect
Ecological Modelling
journal homepage: www.elsevier.com/locate/ecolmodel
A hierarchical analysis of terrestrial ecosystem model Biome-BGC:
Equilibrium analysis and model calibration
Weile Wang
a,b,∗
, Kazuhito Ichii
c
, Hirofumi Hashimoto
a,b
, Andrew R. Michaelis
a,b
,
Peter E. Thornton
d
, Beverly E. Law
e
, Ramakrishna R. Nemani
b
a
California State University, Monterey Bay, Seaside, CA, USA
b
NASA Ames Research Center, Moffett Field, CA, USA
c
Faculty of Symbiotic Systems Science, Fukushima University, Japan
d
Oak Ridge National Lab, Oak Ridge, TN, USA
e
Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR, USA
article info
Article history:
Received 12 June 2008
Received in revised form 23 March 2009
Accepted 27 April 2009
Available online 18 June 2009
Keywords:
Terrestrial ecosystem
Biome-BGC
Hierarchical analysis
Equilibrium analysis
Model calibration
abstract
The increasing complexity of ecosystem models represents a major difficulty in tuning model parameters
and analyzing simulated results. To address this problem, this study develops a hierarchical scheme that
simplifies the Biome-BGC model into three functionally cascaded tiers and analyzes them sequentially.
The first-tier model focuses on leaf-level ecophysiological processes; it simulates evapotranspiration and
photosynthesis with prescribed leaf area index (LAI). The restriction on LAI is then lifted in the following
two model tiers, which analyze how carbon and nitrogen is cycled at the whole-plant level (the second
tier) and in all litter/soil pools (the third tier) to dynamically support the prescribed canopy. In particular,
this study analyzes the steady state of these two model tiers by a set of equilibrium equations that are
derived from Biome-BGC algorithms and are based on the principle of mass balance. Instead of spinning-
up the model for thousands of climate years, these equations are able to estimate carbon/nitrogen stocks
and fluxes of the target (steady-state) ecosystem directly from the results obtained by the first-tier model.
The model hierarchy is examined with model experiments at four AmeriFlux sites. The results indicate that
the proposed scheme can effectively calibrate Biome-BGC to simulate observed fluxes of evapotranspira-
tion and photosynthesis; and the carbon/nitrogen stocks estimated by the equilibrium analysis approach
are highly consistent with the results of model simulations. Therefore, the scheme developed in this study
may serve as a practical guide to calibrate/analyze Biome-BGC; it also provides an efficient way to solve
the problem of model spin-up, especially for applications over large regions. The same methodology may
help analyze other similar ecosystem models as well.
© 2009 Elsevier B.V. All rights reserved.
1. Introduction
Climate change due to anthropogenic increases in greenhouse
gases has lead to concerns about impacts on terrestrial ecosys-
tems, and has generated an imperative for the understanding of,
and the ability to predict, the role of terrestrial ecosystems in the
global carbon cycle (IPCC, 2007). In response to this call, a variety
of biogeochemical ecosystem models have been developed since
the 1980s, including CASA (Potter et al., 1993), CENTURY (Parton
et al., 1993), TEM (Raich et al., 1991; McGuire et al., 1992), BGC
(Running and Coughlan, 1988; Running and Gower, 1991), and
many others. These models are driven by surface climate variables,
∗
Corresponding author at: c/o Ramakrishna R. Nemani, Mail Stop 242-4, NASA
Ames Research Center, Moffett Field, CA 94035, USA. Tel.: +1 650 604 6444;
fax: +1 650 604 6569.
E-mail address: weile.wang@gmail.com (W. Wang).
and employ algorithms to simulate important ecosystem processes
such as the exchange of water between the surface and the atmo-
sphere through evaporation and transpiration, the assimilation and
release of carbon through photosynthesis and respiration, and the
decomposition of organic matter and the transformation of nitro-
gen in soil. As such, they provide an important means to simulate
regional and global carbon/water cycles, and to assess the impacts
of climate variability and its long-term change on these cycles (e.g,
Randerson et al., 1997; Cramer et al., 1999; Schimel et al., 2000;
Nemani et al., 2003).
Early versions of biogeochemical models usually have simple
structures; as models evolve to create more realistic simulations,
their later versions become increasingly sophisticated. For exam-
ple, in Forest-BGC, the first member of the BGC family, leaf area
index (LAI) of the vegetation canopy is prescribed, and carbon allo-
cation is solely controlled by external parameters (Running and
Coughlan, 1988). In the latest BGC model (Biome-BGC, version 4.2),
in contrast, LAI is dynamically simulated and updated at daily scales
0304-3800/$ – see front matter © 2009 Elsevier B.V. All rights reserved.
doi:10.1016/j.ecolmodel.2009.04.051